Plant Epigenetics

Chromatin ImmunoprecipitationProtocol for Histone Modifications and Protein-DNA Binding Analyses in Arabidopsis.- Chromatin Conformation Capture-Based Analysis of Nuclear Architecture.- Metaanalysis of Genome-Wide Chromatin Data.- Localization of Mirnas by In Situ Hybridization in Plants using ConventionalOligonucleotide Probes.- COBRA (Combined Bisulfite Restriction Analysis) Assay for the Analysis ofLocus-Specific Changes in Methylation Patterns.- Analysis of Global Genome Methylation Using the Cytosine-Extension Assay.- In Situ Analysis Of DNA Methylation In Plants.- Analysis of DNA Hydroxymethylation In Arabidopsis UsingColorimetric Assay.- Analysis of DNA Cytosine Methylation Patterns usingMethylation Specific Amplification Polymorphism (MSAP).- Differentially MethylatedRegion - Representational Difference Analysis (DMR-RDA): A Powerful Method to IdentifyDmrs in Uncharacterized Genomes.- Analysis of Small RNA PopulationsUsingHybridization to DNA Tiling Arrays.- Northern Blotting Techniques for Small RNAs.- Stem-Loop Qrt-PCR for the Detection of PlantMicrornas.- Profiling New Small RNA Sequences.- Small RNA Library Preparation and Illumina Sequencing in Plants.- Bioinformatics Analysis of Small RNA Transcriptomes - The Detailed Work Flow.- Increasinga Stable Transformation Efficiency of Arabidopsis by Manipulating theEndogenous Gene Expression using Virus-Induced Gene Silencing.- The Random Oligonucleotide-Primed Synthesis Assay for the Quantification of DNAStrand Breaks.- Profiling Transposable Elements and their Epigenetic Effects in Non-ModelSpecies.