Collaborative Computational Technologies for Biomedical Research / Wiley Series on Technologies for the Pharmaceutical (ePub)

FOREWORD xi Alpheus Bingham PREFACE xv CONTRIBUTORS xix PART I GETTING PEOPLE TO COLLABORATE 1 1. The Need for Collaborative Technologies in Drug Discovery 3 Chris L. Waller, Ramesh V. Durvasula, and Nick Lynch 2. Collaborative Innovation: The Essential Foundation of Scientific Discovery 19 Robert Porter Lynch 3. Models for Collaborations and Computational Biology 39 Shawnmarie Mayrand-Chung, Gabriela Cohen-Freue, and Zsuzsanna Hollander 4. Precompetitive Collaborations in the Pharmaceutical Industry 55 Jackie Hunter 5. Collaborations in Chemistry 85 Sean Ekins, Antony J. Williams, and Christina K. Pikas 6. Consistent Patterns in Large-Scale Collaboration 99 Robin W. Spencer 7. Collaborations Between Chemists and Biologists 113 Victor J. Hruby 8. Ethics of Collaboration 121 Richard J. McGowan, Matthew K. McGowan, and Garrett J. McGowan 9. Intellectual Property Aspects of Collaboration 133 John Wilbanks PART II METHODS AND PROCESSES FOR COLLABORATIONS 147 10. Scientific Networking and Collaborations 149 Edward D. Zanders 11. Cancer Commons: Biomedicine in the Internet Age 161 Jeff Shrager, Jay M. Tenenbaum, and Michael Travers 12. Collaborative Development of Large-Scale Biomedical Ontologies 179 Tania Tudorache and Mark A. Musen 13. Standards for Collaborative Computational Technologies for Biomedical Research 201 Sean Ekins, Antony J. Williams, and Maggie A. Z. Hupcey 14. Collaborative Systems Biology: Open Source, Open Data, and Cloud Computing 209 Brian Pratt 15. Eight Years Using Grids for Life Sciences 221 Vincent Breton, Lydia Maigne, David Sarramia, and David Hill 16. Enabling Precompetitive Translational Research: A Case Study 241 Sándor Szalma 17. Collaboration in Cancer Research Community: Cancer Biomedical Informatics Grid (caBIG) 261 George A. Komatsoulis 18. Leveraging Information Technology for Collaboration in Clinical Trials 281 O. K. Baek PART III TOOLS FOR COLLABORATIONS 301 19. Evolution of Electronic Laboratory Notebooks 303 Keith T. Taylor 20.

SEAN EKINS, MSc, PhD, DSc, is the Principal at
Collaborations in Chemistry, and Collaborations Director at
Collaborative Drug Discovery, Inc., as well as an Adjunct Associate
Professor in the Department of Pharmaceutical Sciences, University
of Maryland School of Pharmacy. He has published more than 170
papers and book chapters on computational and in vitro drug
discovery approaches and has previously edited or co-edited three
books for Wiley.

MAGGIE A. Z. HUPCEY, PhD, is a chemist working within the
Life Sciences and Healthcare Practice of PA Consulting Group in
Princeton, New Jersey. She has worked on collaborative projects for
the design and development of new products and processes in the
medical device, drug delivery, and drug discovery fields, including
presubmission and post-launch regulatory compliance activities.

ANTONY J. WILLIAMS, PhD, FRSC, is currently Vice
President, Strategic Development, at the Royal Society of Chemistry
and holds an adjunct position at UNC-Chapel Hill. He has written
chapters for many books and published more than 100 peer-reviewed
papers and book chapters on NMR, predictive ADME methods,
Internet-based tools, crowdsourcing, and database curation. He is
an active blogger and participant in the Internet chemistry
network.

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